Hi Catherine, This question might not fit in freesurfer mailing list but I'll answer here anyway - Unfortunately, for the command-line track_vis, there is no such option.
Ruopeng On May 7, 2013, at 9:53 AM, "Chu, Catherine,M.D." <cc...@partners.org> wrote: > Dear Freesurfer/TrackVis experts, > > I am using the following command in a batchfile to identify tracks counts > between dozens of preset ROIs. > > track_vis DATAPATHtob0.trk -roi DATAPATHTOROI1.nii -roi2 DATAPATHTOROI2.nii > -o PATHTOOUTPUT.trk > OUTPUT.txt -nr', i, j, i, j, i, j > > Is there a line command I can use so that the tracks identified follow the > rule "either end" in the ROIs instead of the default "any part"? > > Thank you! > Cat > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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