try mri_label2vol cheers Bruce On Mon, 13 May 2013, lujiao luo wrote:
Hello Bruce, Thanks so much for your reply. Yes, you are right, I've obtained the lh.V1.label. But I couldn't figure out how to create a roi.nii.gz mask by using the lhV1.lable file or lhBA.annot, and then I can use it as a seed for my fiber tracking. Yours Lulu. 2013/5/13 Bruce Fischl <fis...@nmr.mgh.harvard.edu> Hi Lulu what version are you running? If it's a newer one you should have label files in the label subdir named [lr]h.V1.label and [lr]h.V1.thresh.label (a thresholded version of the first one). cheers Bruce On Mon, 13 May 2013, lujiao luo wrote: Hello, experts, I am trying to obtain a V1 mask and use it as a seed of my fiber tracking. But I do not know how to get the BA.nii.gz file, and I've obtained BA.ctab and lh.BA.annot files by using flag recon_all. Would someone give me some suggestions about this? Thanks so much for your help! Yours Lulu The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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