hi doug,

bbregister was running into an error trying to do T2pial refinement

sequence of commands and output here:

https://gist.github.com/satra/5934639

and it looks like the absence of FSLDIR

i didn't have FSL installed on this machine - i thought that freesurfer had
it's own version of flirt.

is FSL necessary?

cheers,

satra
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to