Hi,
I am finding a warning at recon-all when creating the folders:
INFO: could not find /Path/subject.mat file for direction cosine info.
INFO: use Analyze 7.5 hdr->hist.orient value: 1, coronal unflipped.
INFO: if not valid, please provide the information in /Path/subject.mat file

What are the consequences of this to image orientation or to registration in 
further steps?
I have sorted the DICOMs using MRIcron (generates .img and .hdr for T1 
acquisition).
Regards,
Pedro.

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