Can I also use mri_surfcluster as it is in qdec since I want to compare the whole brain and masked brain results?
Best regards, Amirhossein Manzouri On Fri, Mar 14, 2014 at 4:49 PM, Douglas N Greve <gr...@nmr.mgh.harvard.edu>wrote: > > you are doing it the right way. There is no difference in the uncorrected > analysis. There will be a difference when you correct for multiple > comparisons > doug > > > > On 03/14/2014 11:15 AM, amirhossein manzouri wrote: > >> Dear Experts, >> I have read the previous posts in the list regarding restricted ROI >> analysis. So I generated my label from tksurfer and used that for group >> difference analysis by adding --label to mri_glmfit, but the result >> (sig.mgh) seems just a masked version of the analysis including whole brain >> ( no difference in significance! ). I expected to see a different pattern >> of significance by limiting the region. Would you please advise if I am >> doing this in a right way? >> >> Best regards, >> Amirhossein Manzouri >> >> >> > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > >
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