Hi Cherisse, i don't understand what you have done. Is the mask a volume mask or surface mask? In mri_cor2label, you can specify a surface to get surface vertex numbers.
doug On 04/02/2014 07:03 PM, Cherisse Onuigbo wrote: > Hello > > I was wondering how to create a label from a binary mask. I created a > mask and then normalized it to the template space. When I tried to use > mri_cor2vol, all the vertex numbers come out as -1. I understand that > the vertex numbers should come out as -1, but when I entered the > coordinates in the display function in spm, it was not in the region. > > Thank you, > Cherisse > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
