what is your mri_vol2surf command line? Can you view the output in
tksurfer? What is your matlab command line?
On 8/18/14 3:34 AM, Nadine Schlichting wrote:
Dear Freesurfers,
I am struggling with a very basic step at the very beginning of my
processing pipeline.
This is what I've done: registered BOLD to anatomical data using
bbregister, results checked with tkregister2 - all seems fine. Then I
want to project BOLD data to the surfaces using mri_vol2surf - no
error so far. BUT when trying to load the mri_vol2surf output into
matlab (load_nifti.m) I get this error:
/
/
/??? Attempted to access hdr.dim(2); index out of bounds because
numel(hdr.dim)=0./
/Error in ==> load_nifti_hdr at 121/
/if(hdr.dim(2) < 0)/
/Error in ==> load_nifti at 80/
/hdr = load_nifti_hdr(niftifile);/
It seems that the hdr struct is completely empty.
Thanks in advance for any kind of help, have a nice week,
Nadine
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