Hi Freesurfers,
I've performed recon-all -all on a subject and found that some of the cortex is missing. I ran "recon-all -skullstrip -wsthresh 30 -clean-bm -no-wsgcaatlas -s sub296.fs" and the cortex appeared, so I added control points in hopes of FS recognizing the cortex, but I got the following error (below) while running "recon-all -autorecon2-cp -s subid" "Excessive topologic defect encountered: could not allocate -987911245 edges for retessellation Cannot allocate memory" I looked at the surface by typing "tkmedit subjid filled.mgz rh.orig.nofix -aux-surface lh.orig.nofix" and the surface is a complete mess (SEE ATTACHED). Do you have any suggestions on how I can salvage this participant? You're expertise would be GREATLY appreciated! Thanks, Jessica
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