Hi Heidi, segmentation of amygdalar subregions is currently not yet implemented in FreeSurfer, but we are working on including this feature soon.
Best, Dorit ----------------------------- Message: 9 Date: Fri, 8 Jan 2016 13:21:48 +0000 From: "Jacobs H (NP)" <h.jac...@maastrichtuniversity.nl> Subject: [Freesurfer] amygdala nuclear subregions To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Message-ID: <d2b5767a.155a7%h.jac...@maastrichtuniversity.nl> Content-Type: text/plain; charset="iso-8859-1" Dear FreeSurfer developers, In the FreeSurferColorLut file I see labels for the subregions of the amygdala. Is it possible to extract the volumes for these regions? And how can I do this? I don't see them in the aseg or aparc stat files. Many thanks! Heidi -------------- next part -------------- An HTML attachment was scrubbed... URL: http://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/attachments/20160108/65569d25/attachment-0001.html ------------------------------
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