Sorry Corinna I meant to answer this the first time but it slipped through the cracks. I doubt there is much you can do if there is that big a lesion. If the topology is wrong and you can't see tissue in those regions it's going to be very hard Bruce
On Wed, 10 Feb 2016, Corinna Bauer wrote: > Dear Experts, > > I have a subject with severe atrophy in bilateral frontal and parietal > regions and after many rounds of edits to the brainmask, wm.mgz, and control > points, these regions are still left uncaptured. Is there a way to edit the > pial surface to include these grey matter regions? I am hesitant to draw > them in via the wm surface since there is no definite WM present. > > I do have a FLAIR also on this subject. > > I've attached a couple examples. > > Thanks! > > Corinna > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.