Hi Fengji

you need to give us more details about the problems before we can help you. What commands failed? What was the screen output?

Note that there is still no such thing as FS 6.0. We are hoping to have it in the relatively near term, but it doesn't exist yet.

cheers
Bruce


On Tue, 1 Mar 2016, Fengji Geng wrote:

Dear fs developers, 

we are attempting to use the stable version of fs 5.1 for processing while
also using the most current version for hippocampal segmentation on the same
set of subjects (freesurfer 6.0 dev version on 28-Jan-2016). However, when
the develop version of fs 6 was installed, we began having an issue with the
fsaverage folder linking to the newest version, when we need it to link to
version 5.1 during processing. The label files that we need for processing
in version 5.1 are not accessible in the new version’s fsaverage
folder. However, before we updated to fs 6.0 dev version on 28-Jan-2016, we
never had this issue. So, we are wondering if the newest develop version of
fs 6.0 does not allow two versions of fs to be used in the same data. 

Looking forward to hearing from you and thanks in advance.

Best,

----- Fengji


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