Can you send me rh_time_spval.mgh?
On 03/01/2016 04:42 PM, Jennifer Legault wrote: > Hi Doug, > > Thank you for responding. I actually realized what was the matter (I > had specified the path for fsaverage which led to the error; this is > no longer an issue so long as I use "--subject fsaverage" instead of > "--subject /path/fsaverage." > > Here is the command I've been running for mri_surfcluster: > > mri_surfcluster --subject fsaverage --hemi rh --in > /path/rh_time_spval.mgh --csd > /usr/global/freesurfer/5.3.0/freesurfer/average/mult-comp-cor/fsaverage/rh/cortex/fwhm01/pos/th40/mc-z.csd > --cwpvalthresh 0.0001 --fdr .05 --no-fixmni --annot aparc --sign pos > --o /path/rh_time_cluster_cwp0001.mgh --cwsig > /path/rh_time_cluster_mni_cwp0001.mgh --sum > /path/rh_time_cluster_mni_sum > > > I do consistently have an issue though where the final output seems to > be inaccurate (even with CWP of p<.0001 and FDR correction, I receive > over 800 significant clusters). I am assuming this is a problem with > the LME multivariate analysis script, although I am not exactly sure > which part of the script needs to be changed. Attached is a > screenshot of the output (visualized with freeview), as well as the > matlab script and the qdec file (with fsid, fsid-base, MRI (time), > group, and eTIV as columns). This script is geared towards examining > changes in the brain after cognitive training lasting 2-3 weeks. If > you have the time to look over this and let me know of any > recommendations you have, it would be greatly appreciated. > > Best, > > Jennifer Legault > > On Tue, Mar 1, 2016 at 3:27 PM, Douglas N Greve > <[email protected]> wrote: >> can you send your command line and terminal output? >> >> On 02/25/2016 01:52 PM, Jennifer Legault wrote: >>> Hi Douglas, >>> >>> Thank you for all your help. When I say "volume" I do mean the FS >>> thickness*area measure. I ran the mri_glmfit with --osgm and for the >>> FWHM received the value of .925737. Assuming that this rounds up to 1, >>> I then went to $FREESURFER_HOME/average/mult-comp-cor/fsaverage to >>> find the CSD file and I selected the fwhm01 csd file. >>> >>> I then ran the mri_surfcluster command, however, I got the following >>> error: >>> >>> ERROR: you have specified srcsubjid=fsaverage on cmdline, but >>> CSD file was created with fsaverage >>> >>> Any suggestions you have would be appreciated. >>> >>> Best, >>> >>> Jen >>> >>> On Thu, Feb 11, 2016 at 1:32 PM, Douglas N Greve >>> <[email protected] <mailto:[email protected]>> wrote: >>> >>> by "volume" do you mean a VBM-type analysis or do you mean the volume >>> that comes out of FS (thickness*area)? If you are going to use a >>> clusterwise correction, then you have to have a FWHM measurement. You >>> can try analyzing it in mri_glmfit with --osgm just to get the >>> FWHM out >>> of it. >>> >>> You should be able to output a .mgh file instead of a .w file >>> >>> >>> On 02/11/2016 01:07 PM, Jennifer Legault wrote: >>> > That's very useful, thank you. In terms of FWHM, I am examining >>> gray >>> > matter volume, not cortical thickness, and was previously instructed >>> > by Martin Reuter not to smooth these data. Do you think it >>> would make >>> > sense then to just use the fwhm01? And in terms of the voxel-wise >>> > threshold, is there a commonly used value for GM volume data? I am >>> > still new to freesurfer and I appreciate any feedback. >>> > >>> > For visualization, after I run the mri_surfcluster the only outputs >>> > are a summary file and a .w file, and freeview doesn't accept this >>> > format. Is it possible to have a cluster-wise corrected map (a >>> > sig.cluster.mgh file) as they do for the Clusterwise Correction for >>> > Multiple Comparisons tutorial here >>> > >>> <https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysis>? >>> > >>> > >>> > Best, >>> > >>> > Jen >>> > >>> > On Thu, Feb 11, 2016 at 11:39 AM, Douglas N Greve >>> > <[email protected] <mailto:[email protected]> >>> <mailto:[email protected] >>> <mailto:[email protected]>>> wrote: >>> > >>> > >>> > >>> > On 02/11/2016 11:19 AM, Jennifer Legault wrote: >>> > > Thank you for your response. Do I need to run the glm_fit-sim >>> > command >>> > > to make the csd file? I feel this would be inappropriate >>> for my >>> > data >>> > > since I already ran the LME model. >>> > No, look in >>> $FREESURFER_HOME/average/mult-comp-cor/fsaverage. You will >>> > need the FWHM though >>> > > >>> > > Second, is there an argument to make an output file that >>> can be >>> > > visualized via freeview? In other words, how can I view >>> my cluster >>> > > thresholded data? >>> > You can use freeview, something like >>> > freeview -f lh.inflated:overlay=sig.mgh >>> > There are other options for loading annotations and >>> curvature. See the >>> > freeview help >>> > > >>> > > Your help is greatly appreciated, >>> > > >>> > > Jen >>> > > >>> > > >>> > > >>> > > On Wed, Feb 10, 2016 at 11:04 PM, Douglas Greve >>> > > <[email protected] >>> <mailto:[email protected]> >>> <mailto:[email protected] <mailto:[email protected]>> >>> > <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>>> wrote: >>> > > >>> > > There is a (very long) command line on that page. Mainly >>> you >>> > need >>> > > a csd file. To get that you need the FWHM of your >>> analysis, the >>> > > voxel-wise threshold, and the sign of the contrast (or >>> abs). >>> > Then >>> > > the relevant output will be the --sum. You can run it with >>> > --help >>> > > to get more info. >>> > > >>> > > >>> > > On 2/10/16 5:11 PM, Jennifer Legault wrote: >>> > >> Thank you very much for your help! I still received a >>> "cannot >>> > >> read file type" error when I only added the path to >>> the output >>> > >> --o part, however when I also added the path to the >>> input file, >>> > >> it worked! >>> > >> >>> > >> I do have one more question: Which argument can I add so >>> > that in >>> > >> my output file I see the clusterwise P value, like it >>> is shown >>> > >> here >>> > >> >>> > >>> >>> <https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/GroupAnalysisClusterSummary>? >>> > >> >>> > >> Best, >>> > >> >>> > >> Jen >>> > >> >>> > >> On Wed, Feb 10, 2016 at 1:50 PM, Douglas N Greve >>> > >> <[email protected] >>> <mailto:[email protected]> >>> <mailto:[email protected] <mailto:[email protected]>> >>> > <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>>> wrote: >>> > >> >>> > >> I meant for the output files, so the --o in >>> particular >>> > >> >>> > >> On 02/10/2016 01:47 PM, Jennifer Legault wrote: >>> > >> > Douglas, >>> > >> > >>> > >> > Thank you for your quick response. When I add --sd >>> > >> [path_location], I >>> > >> > get the following error: >>> > >> > Loading source values >>> > >> > mri_read(): couldn't determine type of file >>> > >> [path_location]/rh_time_spval >>> > >> > ERROR: could not read rh_time_spval as type >>> > >> > >>> > >> > Should I use another argument? >>> > >> > >>> > >> > Best, >>> > >> > >>> > >> > Jen >>> > >> > >>> > >> > >>> > >> > >>> > >> > On Wed, Feb 10, 2016 at 1:41 PM, Douglas N Greve >>> > >> > <[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>>>> wrote: >>> > >> > >>> > >> > Try specifying the full path to the output >>> > >> > >>> > >> > On 02/10/2016 12:59 PM, Jennifer Legault wrote: >>> > >> > > Dear experts, >>> > >> > > >>> > >> > > I am trying to use the cluster >>> thresholding command >>> > >> for my >>> > >> > freesurfer >>> > >> > > LME outputs as referred to here >>> > >> > > >>> > >> > >>> > >> >>> > >>> <https://surfer.nmr.mgh.harvard.edu/fswiki/LinearMixedEffectsModels>. >>> > >> > > Any feedback or comments would be greatly >>> > appreciated. >>> > >> > > >>> > >> > > I am aware that there have been >>> permission denied >>> > >> errors when using >>> > >> > > mri_surfcluster and that applying this patch >>> > >> > > >>> > >> > >>> > >> >>> > >>> >>> <ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/5.3.0-patch/mni152reg> >>> > >> > > should solve the problem (which I tried), >>> however I >>> > >> am still either >>> > >> > > receiving errors stating the permission >>> is denied. >>> > >> > > >>> > >> > > This is the command I am trying to run: >>> > >> > > >>> > >> > > mri_surfcluster --subject fsaverage >>> --hemi rh --in >>> > >> > rh_time_spval.mgh >>> > >> > > --cwpvalthresh 0.05 --fdr .05 --sign pos --o >>> > >> rh_time_cluster --sum >>> > >> > > rh_time_cluster_sum >>> > >> > > >>> > >> > > >>> > >> > > Here is the error log: >>> > >> > > >>> > >> > > mri_surfcluster --subject fsaverage >>> --hemi rh --in >>> > >> rh_time_spval.mgh >>> > >> > > --cwpvalthresh 0.05 --fdr .05 --sign pos --o >>> > >> rh_time_cluster --sum >>> > >> > > rh_time_cluster_sum thsign = pos, id = 1 >>> > >> > > version $Id: mri_surfcluster.c,v 1.51.2.3 >>> > 2012/05/31 >>> > >> 22:10:05 >>> > >> > greve Exp $ >>> > >> > > hemi = rh >>> > >> > > srcid = rh_time_spval.mgh >>> > >> > > srcsubjid = fsaverage >>> > >> > > srcsurf = white >>> > >> > > srcframe = 0 >>> > >> > > thsign = pos >>> > >> > > thmin = -1 >>> > >> > > thmax = -1 >>> > >> > > fdr = 0.05 >>> > >> > > minarea = 0 >>> > >> > > xfmfile = talairach.xfm >>> > >> > > nth = -1 >>> > >> > > outid = rh_time_cluster paint >>> > >> > > sumfile = rh_time_cluster_sum >>> > >> > > subjectsdir = >>> /gpfs/home/jtl190/work/structurals >>> > >> > > FixMNI = 1 >>> > >> > > ------------- XFM matrix (RAS2RAS) >>> --------------- >>> > >> > > >>> > >> > >>> > >> >>> > >>> >>> /gpfs/home/jtl190/work/structurals/fsaverage/mri/transforms/talairach.xfm >>> > >> > > 1.000 0.000 0.000 0.000; >>> > >> > > 0.000 1.000 0.000 0.000; >>> > >> > > 0.000 0.000 1.000 0.000; >>> > >> > > 0.000 0.000 0.000 1.000; >>> > >> > > >>> > ---------------------------------------------------- >>> > >> > > Reading source surface >>> > >> > > >>> > >> /gpfs/home/jtl190/work/structurals/fsaverage/surf/rh.white >>> > >> > > Done reading source surface >>> > >> > > Computing metric properties >>> > >> > > Loading source values >>> > >> > > number of voxels in search space = 163842 >>> > >> > > Done loading source values (nvtxs = 163842) >>> > >> > > overall max = 1 at vertex 27 >>> > >> > > overall min = 1.52021e-05 at vertex 125620 >>> > >> > > surface nvertices 163842 >>> > >> > > surface area 65020.929688 >>> > >> > > surface area 65020.765625 >>> > >> > > Setting voxel-wise threshold with FDR = >>> 0.050000 >>> > >> > > Assuming input map is -log10(p) >>> > >> > > MRISfdr2vwth(): np = 163842, nv = 163842, >>> fdr = >>> > 0.05, >>> > >> vwth=1.04576 >>> > >> > > FDR Voxel-wise threshold is 1.04576 >>> > >> > > Adjusting threshold for 1-tailed test. >>> > >> > > If the input is not a -log10(p) volume, >>> re-run with >>> > >> --no-adjust. >>> > >> > > Searching for Clusters ... >>> > >> > > thmin=1.045757 (0.744727), >>> thmax=-1.000000 (-1), >>> > >> thsignid=1, >>> > >> > > minarea=0.000000 >>> > >> > > Found 9803 clusters >>> > >> > > Max cluster size 5993.586426 >>> > >> > > INFO: fixing MNI talairach coordinates >>> > >> > > Saving thresholded output to rh_time_cluster >>> > >> > > Can't create file >>> > >> > > >>> > >> > >>> > >> >>> > >>> /gpfs/home/jtl190/work/structurals/fsaverage/surf/rh.rh_time_cluster.w >>> > >> > > >>> > >> > > Permission denied >>> > >> > > >>> > >> > > >>> > >> > > >>> > >> > > >>> > >> > > Thank you for taking the time to read >>> this email. >>> > >> > > >>> > >> > > Sincerely, >>> > >> > > >>> > >> > > Jennifer Legault >>> > >> > > >>> > >> > > -- >>> > >> > > Jennifer Legault >>> > >> > > Ph.D candidate, Neuroscience >>> > >> > > Brain, Language, and Computation Lab >>> > >> > > The Pennsylvania State University >>> > >> > > >>> > >> > > >>> > >> > > >>> _______________________________________________ >>> > >> > > Freesurfer mailing list >>> > >> > > [email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>> >>> > >> > <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>>> >>> > >> > >>> > >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> > >> > >>> > >> > -- >>> > >> > Douglas N. Greve, Ph.D. >>> > >> > MGH-NMR Center >>> > >> > [email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> <mailto:[email protected] >>> <mailto:[email protected]>>>> >>> > >> > Phone Number: 617-724-2358 <tel:617-724-2358> >>> <tel:617-724-2358 >>> <tel:617-724-2358>> >>> > <tel:617-724-2358 <tel:617-724-2358> <tel:617-724-2358 >>> <tel:617-724-2358>>> >>> > >> <tel:617-724-2358 <tel:617-724-2358> >>> <tel:617-724-2358 <tel:617-724-2358>> <tel:617-724-2358 >>> <tel:617-724-2358> >>> > <tel:617-724-2358 <tel:617-724-2358>>>> >>> > >> > Fax: 617-726-7422 <tel:617-726-7422> >>> <tel:617-726-7422 <tel:617-726-7422>> >>> > <tel:617-726-7422 <tel:617-726-7422> <tel:617-726-7422 >>> <tel:617-726-7422>>> <tel:617-726-7422 >>> > <tel:617-726-7422> >>> > >> <tel:617-726-7422 <tel:617-726-7422>>> >>> > >> > >>> > >> > Bugs: >>> > surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > >> >>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > >> > >>> > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > >> > FileDrop: >>> https://gate.nmr.mgh.harvard.edu/filedrop2 >>> > >> > >>> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > >> >>> > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > >> > >>> > >> >>> > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > >> > Outgoing: >>> > >> > >>> > ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >>> > >> > >>> > >> > _______________________________________________ >>> > >> > Freesurfer mailing list >>> > >> > [email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>>> >>> > >> > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> > >> > >>> > >> > >>> > >> > The information in this e-mail is intended only >>> > for the >>> > >> person to >>> > >> > whom it is >>> > >> > addressed. If you believe this e-mail was >>> sent to you >>> > >> in error and >>> > >> > the e-mail >>> > >> > contains patient information, please >>> contact the >>> > Partners >>> > >> > Compliance HelpLine at >>> > >> > http://www.partners.org/complianceline . If the >>> > e-mail was >>> > >> sent to >>> > >> > you in error >>> > >> > but does not contain patient information, >>> please >>> > >> contact the >>> > >> > sender and properly >>> > >> > dispose of the e-mail. >>> > >> > >>> > >> > >>> > >> > >>> > >> > >>> > >> > -- >>> > >> > Jennifer Legault >>> > >> > Ph.D candidate, Neuroscience >>> > >> > Brain, Language, and Computation Lab >>> > >> > The Pennsylvania State University >>> > >> > >>> > >> > >>> > >> > _______________________________________________ >>> > >> > Freesurfer mailing list >>> > >> > [email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>> >>> > >> > >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> > >> >>> > >> -- >>> > >> Douglas N. Greve, Ph.D. >>> > >> MGH-NMR Center >>> > >> [email protected] >>> <mailto:[email protected]> >>> <mailto:[email protected] <mailto:[email protected]>> >>> > <mailto:[email protected] >>> <mailto:[email protected]> >>> <mailto:[email protected] <mailto:[email protected]>>> >>> > >> Phone Number: 617-724-2358 <tel:617-724-2358> >>> > <tel:617-724-2358 <tel:617-724-2358>> >>> > >> Fax: 617-726-7422 <tel:617-726-7422> >>> <tel:617-726-7422 >>> > <tel:617-726-7422>> >>> > >> >>> > >> Bugs: >>> surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > >> >>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > >> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >>> > >> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > >> >>> > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > >> Outgoing: >>> > >> >>> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >>> > >> >>> > >> _______________________________________________ >>> > >> Freesurfer mailing list >>> > >> [email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>> >>> > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> > >> >>> > >> >>> > >> >>> > >> >>> > >> -- >>> > >> Jennifer Legault >>> > >> Ph.D candidate, Neuroscience >>> > >> Brain, Language, and Computation Lab >>> > >> The Pennsylvania State University >>> > >> >>> > >> >>> > >> _______________________________________________ >>> > >> Freesurfer mailing list >>> > >> [email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > >> <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>> >>> > >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> > > >>> > > >>> > > _______________________________________________ >>> > > Freesurfer mailing list >>> > > [email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > <mailto:[email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>>> >>> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> > > >>> > > >>> > > The information in this e-mail is intended only for the >>> > person to >>> > > whom it is >>> > > addressed. If you believe this e-mail was sent to you in >>> > error and >>> > > the e-mail >>> > > contains patient information, please contact the Partners >>> > > Compliance HelpLine at >>> > > http://www.partners.org/complianceline . If the e-mail was >>> sent to >>> > > you in error >>> > > but does not contain patient information, please >>> contact the >>> > > sender and properly >>> > > dispose of the e-mail. >>> > > >>> > > >>> > > >>> > > >>> > > -- >>> > > Jennifer Legault >>> > > Ph.D candidate, Neuroscience >>> > > Brain, Language, and Computation Lab >>> > > The Pennsylvania State University >>> > > >>> > > >>> > > _______________________________________________ >>> > > Freesurfer mailing list >>> > > [email protected] >>> <mailto:[email protected]> >>> > <mailto:[email protected] >>> <mailto:[email protected]>> >>> > > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> > >>> > -- >>> > Douglas N. Greve, Ph.D. >>> > MGH-NMR Center >>> > [email protected] <mailto:[email protected]> >>> <mailto:[email protected] <mailto:[email protected]>> >>> > Phone Number: 617-724-2358 >>> > Fax: 617-726-7422 >>> > >>> > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >>> > www.nmr.mgh.harvard.edu/facility/filedrop/index.html >>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> > Outgoing: >>> > ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >>> > >>> > _______________________________________________ >>> > Freesurfer mailing list >>> > [email protected] >>> <mailto:[email protected]> >>> <mailto:[email protected] >>> <mailto:[email protected]>> >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> > >>> > >>> > >>> > >>> > -- >>> > Jennifer Legault >>> > Ph.D candidate, Neuroscience >>> > Brain, Language, and Computation Lab >>> > The Pennsylvania State University >>> > >>> > >>> > _______________________________________________ >>> > Freesurfer mailing list >>> > [email protected] >>> <mailto:[email protected]> >>> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> -- >>> Douglas N. Greve, Ph.D. >>> MGH-NMR Center >>> [email protected] <mailto:[email protected]> >>> Phone Number: 617-724-2358 >>> Fax: 617-726-7422 >>> >>> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >>> <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> >>> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >>> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >>> <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> >>> Outgoing: >>> ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> [email protected] <mailto:[email protected]> >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >>> >>> >>> >>> >>> -- >>> Jennifer Legault >>> Ph.D candidate, Neuroscience >>> Brain, Language, and Computation Lab >>> The Pennsylvania State University >>> >>> >>> _______________________________________________ >>> Freesurfer mailing list >>> [email protected] >>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer >> -- >> Douglas N. Greve, Ph.D. >> MGH-NMR Center >> [email protected] >> Phone Number: 617-724-2358 >> Fax: 617-726-7422 >> >> Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting >> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 >> www.nmr.mgh.harvard.edu/facility/filedrop/index.html >> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ >> >> _______________________________________________ >> Freesurfer mailing list >> [email protected] >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > _______________________________________________ > Freesurfer mailing list > [email protected] > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center [email protected] Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list [email protected] https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
