Hi Bryan - It'll convert whatever input you give it to nifti, so it's fine if your input is already nifti.
Best, a.y On Wed, 6 Apr 2016, Chiu, Bryan (PHTH) wrote:
Hi, I’m looking to do some DTI analysis with dt_recon. I have Philips acquired DTI images in par/rec. I ran dcm2nii and have retrieved the associated *bval, *bvec and *nii.gz files that come out. In the tutorial it mentions the -i flag requiring a dcm image. Is it possible to pass a *.nii.gz file ? Regards, _______________________________________ Bryan Chiu Research Assistant Aging, Mobility, and Cognitive Neuroscience Lab Djavad Mowafaghian Centre for Brain Health Department of Physical Therapy Faculty of Medicine University of British Columbia
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