Hi Gaurang
it looks like you edited the white matter, but not in the wm.mgz, which
is what we require. What volume (i.e. what was the name of the file you
loaded) did you edit?
cheers
Bruce
On Tue, 17 May 2016, Limachia, Gaurang (NIH/NINDS) [F]
wrote:
I edited the white matter, and then ran recon-all command. The image I
included shows that the white matter changes, but the contour lines have
not changed. Subsequently, how do I change the contour lines to reflect
the changes I made to the white matter. Additionally, is changing the
control points the way to change grey matter?
Thanks,
Gaurang
On 5/17/16, 5:44 PM, "Bruce Fischl" <[email protected]> wrote:
Hi Gaurang
what volume are you editing? You should be editing the wm.mgz.
cheers
Bruce
On Tue, 17
May 2016, Limachia, Gaurang (NIH/NINDS) [F] wrote:
This is how the white matter changes look like after making corrections
and
running recon all.
From: "Limachia , Gaurang (NIH/NINDS) [F]" <[email protected]>
Reply-To: Freesurfer support list <[email protected]>
Date: Tuesday, May 17, 2016 at 4:49 PM
To: Freesurfer support list <[email protected]>
Subject: [Freesurfer] Freesurfer
I made the necessary changes to the white matter, and when I ran recon
all
the changes with the voxels showed up, but there was no change to the
contour lines. In order to change the gray matter volume, I can¹t find
the
changes I already made on the white matter (the picture with green
control
points). If I am able to see the changes I made to the white matter, I
can
utilize the control points to modify the segmentation. Also will this
impact the gray matter volume as well as per your previous response to
my
question.
Thanks,
Gaurang
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