Hello, I have similar problem. " "Error:Cannot find CTF archive /autofs/cluster/freesurfer/centos6_x86_64/dev/bin/segmentSubjectT1_autoEstimateAlveusML.ctf" the file is here but when I try to execute it, it's always missing some library (libmwi18n.so for example, it was missing others before that I added on my computer, but it never ends....) I am on ubuntu 14.04. I thought that the problem is linked to the matlab runtime. I installed the 2012b. I tried newer version. installed again the 2012b.
Regards, Pierre On Mon, Jun 27, 2016 at 4:05 PM, Permesh Dhillon < permesh.dhil...@nottingham.ac.uk> wrote: > Hello FreeSurfer Developers, > > I’m having issues with the hippocampal subfields segmentation using OS X > Yosemite v10.10.5, Freesurfer dev version 6.0, Freesurfer Subject Stamp: > freesurfer-Linux-centos6_x86_64-stable-pub-v5.2.0 Current Stamp: > freesurfer-Linux-centos6_x86_64-dev-20160616-8264611. > > I ran the recon-all -s VE002 -hippocampal-subfields-T1 command and keep > getting an error message : Error:CTF file > '/usr/local/freesurfer-dev/bin/segmentSubjectT1_autoEstimateAlveusML.ctf' > failed to open for 'Read' access. Error message: 'Open a zip file for > read/modify failed.’ > > The segmented hippocampal files as described on free surfer wiki cannot > be found under the subject ‘mri’ folder. > I understand other users have complained of a similar issue within the > last week. > > I’d ve grateful if you could assist me with the issue above. > > Many thanks > Permesh > > > > This message and any attachment are intended solely for the addressee > and may contain confidential information. If you have received this > message in error, please send it back to me, and immediately delete it. > > Please do not use, copy or disclose the information contained in this > message or in any attachment. Any views or opinions expressed by the > author of this email do not necessarily reflect the views of the > University of Nottingham. > > This message has been checked for viruses but the contents of an > attachment may still contain software viruses which could damage your > computer system, you are advised to perform your own checks. Email > communications with the University of Nottingham may be monitored as > permitted by UK legislation. > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it > is > addressed. If you believe this e-mail was sent to you in error and the > e-mail > contains patient information, please contact the Partners Compliance > HelpLine at > http://www.partners.org/complianceline . If the e-mail was sent to you in > error > but does not contain patient information, please contact the sender and > properly > dispose of the e-mail. > > -- DEMAN Pierre Mobile : +33 7 82 57 80 94
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