Hello all,
I have run mri_convert on a series of dicoms and received the following error
for several of my images. As with the previous bug report for this I have run
mri_info on my dicom series and it’s output is below. My main concern is since
these dicoms are being jumbled up and I am not sure what that warning means. Is
it the dicom header it is comparing? Can you elaborate or put me on track to
debug this error?
Thanks,
Olivia
mri_info is below:
mri_info 500/Image_SLC0_CON0_PHS0_REP1_SET0_AVE0_2.dcm
Getting Series No
Scanning Directory
INFO: Found 9218 files in 500
INFO: Scanning for Series Number 3076
INFO: found 4608 files in series
INFO: loading series header info.
INFO: sorting.
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC0_CON0_PHS0_REP13_SET0_AVE0_2.dcm
File2: 500/Image_SLC0_CON0_PHS0_REP1_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC0_CON0_PHS0_REP25_SET0_AVE0_2.dcm
File2: 500/Image_SLC0_CON0_PHS0_REP2_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC0_CON0_PHS0_REP37_SET0_AVE0_2.dcm
File2: 500/Image_SLC0_CON0_PHS0_REP3_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC0_CON0_PHS0_REP49_SET0_AVE0_2.dcm
File2: 500/Image_SLC0_CON0_PHS0_REP4_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC0_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC0_CON0_PHS0_REP61_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC0_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC0_CON0_PHS0_REP73_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC0_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC0_CON0_PHS0_REP85_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC10_CON0_PHS0_REP1_SET0_AVE0_2.dcm
File2: 500/Image_SLC10_CON0_PHS0_REP20_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC10_CON0_PHS0_REP2_SET0_AVE0_2.dcm
File2: 500/Image_SLC10_CON0_PHS0_REP32_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC10_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC10_CON0_PHS0_REP56_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC10_CON0_PHS0_REP3_SET0_AVE0_2.dcm
File2: 500/Image_SLC10_CON0_PHS0_REP44_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC10_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC10_CON0_PHS0_REP68_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC10_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC10_CON0_PHS0_REP80_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP0_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP10_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC10_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC10_CON0_PHS0_REP92_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP1_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP22_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP3_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP46_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP58_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP82_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP94_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP70_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP2_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP34_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC11_CON0_PHS0_REP106_SET0_AVE0_2.dcm
File2: 500/Image_SLC11_CON0_PHS0_REP8_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC10_CON0_PHS0_REP104_SET0_AVE0_2.dcm
File2: 500/Image_SLC10_CON0_PHS0_REP8_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC1_CON0_PHS0_REP15_SET0_AVE0_2.dcm
File2: 500/Image_SLC1_CON0_PHS0_REP1_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC1_CON0_PHS0_REP27_SET0_AVE0_2.dcm
File2: 500/Image_SLC1_CON0_PHS0_REP2_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC1_CON0_PHS0_REP39_SET0_AVE0_2.dcm
File2: 500/Image_SLC1_CON0_PHS0_REP3_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC1_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC1_CON0_PHS0_REP51_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC1_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC1_CON0_PHS0_REP75_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC1_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC1_CON0_PHS0_REP63_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC1_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC1_CON0_PHS0_REP87_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC2_CON0_PHS0_REP17_SET0_AVE0_2.dcm
File2: 500/Image_SLC2_CON0_PHS0_REP1_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC2_CON0_PHS0_REP29_SET0_AVE0_2.dcm
File2: 500/Image_SLC2_CON0_PHS0_REP2_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC2_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC2_CON0_PHS0_REP53_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC2_CON0_PHS0_REP3_SET0_AVE0_2.dcm
File2: 500/Image_SLC2_CON0_PHS0_REP41_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC2_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC2_CON0_PHS0_REP65_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC2_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC2_CON0_PHS0_REP89_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC2_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC2_CON0_PHS0_REP77_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC3_CON0_PHS0_REP19_SET0_AVE0_2.dcm
File2: 500/Image_SLC3_CON0_PHS0_REP1_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC3_CON0_PHS0_REP3_SET0_AVE0_2.dcm
File2: 500/Image_SLC3_CON0_PHS0_REP43_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC3_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC3_CON0_PHS0_REP67_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC3_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC3_CON0_PHS0_REP55_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC3_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC3_CON0_PHS0_REP79_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC3_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC3_CON0_PHS0_REP91_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC3_CON0_PHS0_REP2_SET0_AVE0_2.dcm
File2: 500/Image_SLC3_CON0_PHS0_REP31_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC4_CON0_PHS0_REP1_SET0_AVE0_2.dcm
File2: 500/Image_SLC4_CON0_PHS0_REP21_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC4_CON0_PHS0_REP2_SET0_AVE0_2.dcm
File2: 500/Image_SLC4_CON0_PHS0_REP33_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC4_CON0_PHS0_REP3_SET0_AVE0_2.dcm
File2: 500/Image_SLC4_CON0_PHS0_REP45_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC4_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC4_CON0_PHS0_REP57_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC4_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC4_CON0_PHS0_REP69_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC4_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC4_CON0_PHS0_REP93_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC5_CON0_PHS0_REP0_SET0_AVE0_2.dcm
File2: 500/Image_SLC5_CON0_PHS0_REP11_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC4_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC4_CON0_PHS0_REP81_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC5_CON0_PHS0_REP1_SET0_AVE0_2.dcm
File2: 500/Image_SLC5_CON0_PHS0_REP23_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC4_CON0_PHS0_REP0_SET0_AVE0_2.dcm
File2: 500/Image_SLC4_CON0_PHS0_REP9_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC5_CON0_PHS0_REP3_SET0_AVE0_2.dcm
File2: 500/Image_SLC5_CON0_PHS0_REP47_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC5_CON0_PHS0_REP2_SET0_AVE0_2.dcm
File2: 500/Image_SLC5_CON0_PHS0_REP35_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC5_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC5_CON0_PHS0_REP71_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC5_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC5_CON0_PHS0_REP83_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC5_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC5_CON0_PHS0_REP95_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC5_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC5_CON0_PHS0_REP59_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC6_CON0_PHS0_REP24_SET0_AVE0_2.dcm
File2: 500/Image_SLC6_CON0_PHS0_REP2_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC6_CON0_PHS0_REP48_SET0_AVE0_2.dcm
File2: 500/Image_SLC6_CON0_PHS0_REP4_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC6_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC6_CON0_PHS0_REP60_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC6_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC6_CON0_PHS0_REP72_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC6_CON0_PHS0_REP8_SET0_AVE0_2.dcm
File2: 500/Image_SLC6_CON0_PHS0_REP96_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC6_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC6_CON0_PHS0_REP84_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC6_CON0_PHS0_REP36_SET0_AVE0_2.dcm
File2: 500/Image_SLC6_CON0_PHS0_REP3_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC6_CON0_PHS0_REP12_SET0_AVE0_2.dcm
File2: 500/Image_SLC6_CON0_PHS0_REP1_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC7_CON0_PHS0_REP14_SET0_AVE0_2.dcm
File2: 500/Image_SLC7_CON0_PHS0_REP1_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC7_CON0_PHS0_REP26_SET0_AVE0_2.dcm
File2: 500/Image_SLC7_CON0_PHS0_REP2_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC7_CON0_PHS0_REP38_SET0_AVE0_2.dcm
File2: 500/Image_SLC7_CON0_PHS0_REP3_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC7_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC7_CON0_PHS0_REP50_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC7_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC7_CON0_PHS0_REP74_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC7_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC7_CON0_PHS0_REP62_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC7_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC7_CON0_PHS0_REP86_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC7_CON0_PHS0_REP8_SET0_AVE0_2.dcm
File2: 500/Image_SLC7_CON0_PHS0_REP98_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC8_CON0_PHS0_REP16_SET0_AVE0_2.dcm
File2: 500/Image_SLC8_CON0_PHS0_REP1_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC8_CON0_PHS0_REP28_SET0_AVE0_2.dcm
File2: 500/Image_SLC8_CON0_PHS0_REP2_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC8_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC8_CON0_PHS0_REP52_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC8_CON0_PHS0_REP3_SET0_AVE0_2.dcm
File2: 500/Image_SLC8_CON0_PHS0_REP40_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC8_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC8_CON0_PHS0_REP64_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC8_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC8_CON0_PHS0_REP88_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC8_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC8_CON0_PHS0_REP76_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC9_CON0_PHS0_REP18_SET0_AVE0_2.dcm
File2: 500/Image_SLC9_CON0_PHS0_REP1_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC9_CON0_PHS0_REP2_SET0_AVE0_2.dcm
File2: 500/Image_SLC9_CON0_PHS0_REP30_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC9_CON0_PHS0_REP3_SET0_AVE0_2.dcm
File2: 500/Image_SLC9_CON0_PHS0_REP42_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC9_CON0_PHS0_REP5_SET0_AVE0_2.dcm
File2: 500/Image_SLC9_CON0_PHS0_REP66_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC9_CON0_PHS0_REP4_SET0_AVE0_2.dcm
File2: 500/Image_SLC9_CON0_PHS0_REP54_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC9_CON0_PHS0_REP6_SET0_AVE0_2.dcm
File2: 500/Image_SLC9_CON0_PHS0_REP78_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC9_CON0_PHS0_REP7_SET0_AVE0_2.dcm
File2: 500/Image_SLC9_CON0_PHS0_REP90_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC9_CON0_PHS0_REP102_SET0_AVE0_2.dcm
File2: 500/Image_SLC9_CON0_PHS0_REP8_SET0_AVE0_2.dcm
WARNING: files are not found to be different and cannot be sorted
File1: 500/Image_SLC8_CON0_PHS0_REP100_SET0_AVE0_2.dcm
File2: 500/Image_SLC8_CON0_PHS0_REP8_SET0_AVE0_2.dcm
RunNo = 3075
WARNING: file 500/Image_SLC6_CON0_PHS0_REP0_SET0_AVE0_2.dcm does not contain a
Siemens ASCII header
has this file been anonymized?
Proceeding as best as I can ...
INFO: (380 380 12), nframes = 384, ismosaic=0
PE Dir ROW ROW
Volume information for 500/Image_SLC0_CON0_PHS0_REP1_SET0_AVE0_2.dcm
type: siemens_dicom
dimensions: 380 x 380 x 12 x 384
voxel sizes: 0.5053, 0.5053, 0.5000
type: SHORT (4)
fov: 380.000
dof: 0
xstart: -190.0, xend: 190.0
ystart: -190.0, yend: 190.0
zstart: -6.0, zend: 6.0
TR: 1250.00 msec, TE: 24.60 msec, TI: 2500.00 msec, flip angle:
40.00 degrees
nframes: 384
PhEncDir: ROW
ras xform present
xform info: x_r = 1.0000, y_r = -0.0000, z_r = 0.0000, c_r = -0.0000
: x_a = -0.0000, y_a = -0.7593, z_a = -0.6508, c_a = -41.5207
: x_s = 0.0000, y_s = -0.6508, z_s = 0.7593, c_s = -3.6854
Orientation : RPS
Primary Slice Direction: axial
voxel to ras transform:
0.5053 -0.0000 0.0000 -96.0000
-0.0000 -0.3836 -0.3254 33.3216
0.0000 -0.3288 0.3796 56.5112
0.0000 0.0000 0.0000 1.0000
voxel-to-ras determinant -0.127645
ras to voxel transform:
1.9792 -0.0000 -0.0000 190.0001
0.0000 -1.5027 -1.2880 122.8593
-0.0000 -1.3015 1.5185 -42.4449
0.0000 0.0000 0.0000 1.0000
_______________________________________________
Freesurfer mailing list
[email protected]
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.