The entire medial wall has thickness values of 0 because there is no cortex there. There needs to be a surface in that area because we need a closed surface.

On 10/12/16 8:10 PM, Taha Abdullah wrote:
Hello All,

Quick question, I ran recon-all with the qcache option and after converting the ?.thickness.fsaverage.mgh to an ascii text file via mri_convert I am noticing some vertices have 0mm thickness and it varies, for example, one subject had 53 vertices labeled as zeros while another had over 9,000 vertices. Is there a method I can use to have a thickness value for each of the 163000+ vertices? I am not sure if this is a possible registration issue to mni305.

Thanks in advance,
/Taha Abdullah/
/Department of Physiology,/
/Northwestern University Feinberg School of Medicine
/MS in Physiology and Biophysics, Georgetown University 2015/
/Work Cell: (312)-451-8468/

Freesurfer mailing list

Freesurfer mailing list

The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at . If the e-mail was sent to you in error
but does not contain patient information, please contact the sender and properly
dispose of the e-mail.

Reply via email to