Hi Lauri, it depends on what you mean by template. If you mean an intensity averaged image, then no. But if you mean probabilities in a reference space, then yes. You can visualize the atlas with (warning: the viewer is a big buggy): cd $FREESURFER_HOME/average/HippoSF/atlas kvlViewMeshCollectionWithGUI AtlasMesh.gz Cheers, /Eugenio
Juan Eugenio Iglesias ERC Senior Research Fellow Translational Imaging Group University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/ On 20 Feb 2017, at 17:12, Tuominen, Lauri Johannes <[email protected]<mailto:[email protected]>> wrote: Hi everyone, Is there a template of the hippocampal subfields in some average space? Best Lauri Tuominen _______________________________________________ Freesurfer mailing list [email protected]<mailto:[email protected]> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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