No. When we ran the unsetenv FS_LOAD_DWI, we got command not found error. Thanks, Janani
-----Original Message----- From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Douglas N Greve Sent: 12 September 2017 21:42 To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mri_convert: line 3: 38445 Segmentation fault Do you mean that the error is still there even after running the unsetenv command? And you ran them from the shell, one after the other? On 09/12/2017 02:27 AM, M Janani wrote: > Hi Douglas, > > We tried running this command. But command not found error. > > Thanks, > Janani > > > > > -----Original Message----- > From: freesurfer-boun...@nmr.mgh.harvard.edu > [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Douglas N Greve > Sent: 12 September 2017 01:25 > To: freesurfer@nmr.mgh.harvard.edu > Subject: Re: [Freesurfer] mri_convert: line 3: 38445 Segmentation fault > > Try running > > unsetenv FS_LOAD_DWI > > > then re-running recon-all > > On 09/11/2017 12:57 PM, M Janani wrote: >> Hi Team, >> >> Am getting segmentation error during the >> reconstruction process. >> >> Please help in resolving the error. >> >> I have attached log for reference. >> >> Thanks, >> >> Janani >> >> >> >> ::DISCLAIMER:: >> ---------------------------------------------------------------------- >> ---------------------------------------------------------------------- >> -------- >> >> The contents of this e-mail and any attachment(s) are confidential and >> intended for the named recipient(s) only. >> E-mail transmission is not guaranteed to be secure or error-free as >> information could be intercepted, corrupted, lost, destroyed, arrive >> late or incomplete, or may contain viruses in transmission. The e mail >> and its contents (with or without referred errors) shall therefore not >> attach any liability on the originator or HCL or its affiliates. >> Views or opinions, if any, presented in this email are solely those of >> the author and may not necessarily reflect the views or opinions of >> HCL or its affiliates. Any form of reproduction, dissemination, >> copying, disclosure, modification, distribution and / or publication >> of this message without the prior written consent of authorized >> representative of HCL is strictly prohibited. If you have received >> this email in error please delete it and notify the sender >> immediately. >> Before opening any email and/or attachments, please check them for >> viruses and other defects. >> >> ---------------------------------------------------------------------- >> ---------------------------------------------------------------------- >> -------- >> >> >> >> _______________________________________________ >> Freesurfer mailing list >> Freesurfer@nmr.mgh.harvard.edu >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > -- > Douglas N. Greve, Ph.D. > MGH-NMR Center > gr...@nmr.mgh.harvard.edu > Phone Number: 617-724-2358 > Fax: 617-726-7422 > > Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting > FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 > www.nmr.mgh.harvard.edu/facility/filedrop/index.html > Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > The information in this e-mail is intended only for the person to whom it is > addressed. If you believe this e-mail was sent to you in error and the e-mail > contains patient information, please contact the Partners Compliance HelpLine > at http://www.partners.org/complianceline . If the e-mail was sent to you in > error but does not contain patient information, please contact the sender and > properly dispose of the e-mail. > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > -- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
