Hi M del Mar,

Okay, I just updated the script at 
https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0-patch/make_average_surface.
Let me know if the issue continues.

best,
Andrew

On Dec 22, 2017, at 9:25 AM, M del Mar Velasco 
<melly_2...@hotmail.com<mailto:melly_2...@hotmail.com>> wrote:

Hi,
I am sorry for insisting, but I have found a new mistake in your new version of 
make_average_surface.
rh.medial_wall.label contains 13733 vertex, it is a desired result. However, 
rh.cortex.label contains all 163842 vertex, i.e, it covers medial wall area 
too. That's why we still have the same problem because we want to do statistic 
tests just over the cortex (without medial wall). It also happens with left 
hemisphere.

Could you please take a look at that issue?

Thanks very much,

M del Mar
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