Use bbregister. Run with --help to get docs (make sure to use --projfrac 0.5). Once you have it on the surface, you can step through each frame in freeview
On 04/05/2018 01:49 PM, Crawford, Anna wrote: > Hello, > > I have a time series (.hdr/.img) that I want to overlay onto a > surface, specifically the inflated surface from the anatomy. I suspect > I have to use mri_vol2surf, which requires a source registration > file. How do I get this file? Then once I have this file, will I be > able to view step by step through the time series on the inflated volume? > > Thanks for your help, > Anna > > > =================================== > > Please consider the environment before printing this e-mail > > Cleveland Clinic is currently ranked as the No. 2 hospital in the > country by U.S. News & World Report (2017-2018). Visit us online at > http://www.clevelandclinic.org for a complete listing of our services, > staff and locations. Confidentiality Note: This message is intended > for use only by the individual or entity to which it is addressed and > may contain information that is privileged, confidential, and exempt > from disclosure under applicable law. If the reader of this message is > not the intended recipient or the employee or agent responsible for > delivering the message to the intended recipient, you are hereby > notified that any dissemination, distribution or copying of this > communication is strictly prohibited. If you have received this > communication in error, please contact the sender immediately and > destroy the material in its entirety, whether electronic or hard copy. > Thank you. > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
