Hi K, your original error is usually due to an incomplete download. You might
want to try redownloading and untaring again
Best,
Andrew
From: <freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Schumman Resonance
<schumm...@gmail.com>
Reply-To: FS Help <freesurfer@nmr.mgh.harvard.edu>
Date: Saturday, August 11, 2018 at 9:24 AM
To: FS Help <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] Untar and sh files in dev version
External Email - Use Caution
Thanks for your response, but I already have the stable release version in
another system.
What I'd like to do now is to run the development version.
Thanks,
K
On Sat, Aug 11, 2018 at 1:22 AM, Dicamillo, Robert
<rdicami...@mgh.harvard.edu<mailto:rdicami...@mgh.harvard.edu>> wrote:
Hello K,
Can you try downloading the 6.0.0 release archive from the web site (please
note it is 4.8G),
freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz<ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz>
Then you will need 5 GB of space to uncompress it. I would add the v option so
you can see the expansion in progress,
$ tar zxvpf freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz
- Rob
On Aug 11, 2018, at 2:55 AM, Schumman Resonance
<schumm...@gmail.com<mailto:schumm...@gmail.com>> wrote:
External Email - Use Caution
Thanks for your response.
I run the command you suggested and this is what I got:
freesurfer/average/mult-comp-cor/fsaverage_sym/rh/cortex/fwhm04/pos/th33/mc-z.csd:
(Empty error message)
tar: Error exit delayed from previous errors.
Also, still no .sh files...
Best,
K
On Fri, Aug 10, 2018 at 7:52 PM, Dicamillo, Robert
<rdicami...@mgh.harvard.edu<mailto:rdicami...@mgh.harvard.edu>> wrote:
Hello Schumman,
Try the following command on the tar archive (cut and paste it if you like)
$ tar zxpf freesurfer-linux-centos6_x86_64-dev.tar.gz
and then take a look at the files.
- Rob
On Aug 10, 2018, at 10:25 PM, Schumman Resonance
<schumm...@gmail.com<mailto:schumm...@gmail.com>> wrote:
External Email - Use Caution
Hi,
Couple of newbie questions. I downloaded the dev version of freesurfer and did:
tar xvzf
freesurfer-linux-centos6_x86_64-dev.tar.gz
to get
gzip: stdin: unexpected end of file
tar: Unexpected EOF in archive
tar: Unexpected EOF in archive
tar: Error is not recoverable: exiting now
Also, when I ls the folder I couldn't see the SetUpFreesurfer.sh and
SurferEnv.sh only the csh files.
Any pointers how to solve these would be appreciated.
Thanks,
S
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The information in this e-mail is intended only for the person to whom it is
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contains patient information, please contact the Partners Compliance HelpLine at
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but does not contain patient information, please contact the sender and properly
dispose of the e-mail.
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The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Partners Compliance HelpLine at
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but does not contain patient information, please contact the sender and properly
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