Hi Paul, you will need aseg and maybe more in the -long runs anyway. But if you really want to stop after norm
… -autorecon1 -gcareg -canorm passing autorecon2 will do the whole block : https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllTableStableV6.0 <https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllTableStableV6.0> Best, Martin > On 10. Aug 2018, at 18:01, miracle ozzoude <miracoo...@gmail.com> wrote: > > External Email - Use Caution > > > Hello FreeSurfer team, > > In order to create the longitudinal base after norm.mgz, Is the command below > the right way to end recon-all after creating norm.mgz? > > recon-all -s subjectID -autorecon1 -autorecon2 -i T1image -canorm. > > Thank you. > > Best, > Paul > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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