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Hello freesurfer experts,
when trying to run ‘ft_prepare_mesh’ command from fieldtrip with MATLAB R2018a,
I run into an error.
dyld: lazy symbol binding failed: Symbol not found: ___emutls_get_address
Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
Expected in: /usr/lib/libSystem.B.dylib
dyld: Symbol not found: ___emutls_get_address
Referenced from: /Applications/freesurfer/bin/../lib/gcc/lib/libgomp.1.dylib
Expected in: /usr/lib/libSystem.B.dylib
mris_fill -c -r 1
/Users/okadometoshiki/Desktop/SubjectUCI29/freesurfer/surf/lh.pial
/private/var/folders/cc/fv5fk09d3hj5g5kx7dg7pqq80000gn/T/tp0a8d7856_136c_4156_bf73_d23f64bbf687_pial.filled.mgz:
Aborted
reading filled volume...
gunzip: can't stat:
/private/var/folders/cc/fv5fk09d3hj5g5kx7dg7pqq80000gn/T/tp0a8d7856_136c_4156_bf73_d23f64bbf687_pial.filled.mgz
(/private/var/folders/cc/fv5fk09d3hj5g5kx7dg7pqq80000gn/T/tp0a8d7856_136c_4156_bf73_d23f64bbf687_pial.filled.mgz.gz):
No such file or directory
ERROR: problem reading fname
I’m running this on a iMac, macOS High Sierra 10.13.6, with
freesurfer-Darwin-OSX-stable-pub-v6.0.0-2beb96c.
From past archives, I think this is because of SIP. So I disabled SIP of OSX,
but I run into same errors.
I tried different subjects, which caused similar errors.
Any ideas would be greatly appreciated, thank you!
========
Toshiki Okadome
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