Yes, see fcseedcor -help

On 11/11/18 4:40 AM, Maedeh Khalilian wrote:

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Dear FreeSurfer experts,
I have a general question, if i have a parcellation(an annotation file e.g 
aparc.annot which is the output of FreeSurfer) is FreeSurfer able to calculate 
the functional connectivity between the regions(parcels)  using rs-fMRI data?
I mean can I have a 68*68 matrix showing the functional connectivity between 
each pair of regions(parcels) at the end?
I would be grateful if u could help me.
best regards,
Maedeh



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