Use something like
mri_segstats --seg ocn.mgh --i beta.mgh --excludeid 0 --avgwf 
beta.clusters.dat

See mri_glmfit-sim --help for more info on the OCN file and mri_segstats 
--help for info on the avgwf file


On 11/29/2018 04:40 PM, Jahan, Bushra wrote:
> I am wondering how to extract beta values from the clusters of task 
> functional data, particularly output of the multiple comparisons 
> correction?
>
> Aava Jahan
>
>
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> Freesurfer@nmr.mgh.harvard.edu
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