External Email - Use Caution        

Dear FS experts,
I would like to move PET image to MNI152. What is the correct command to do so. 
I tried
mri_vol2vol --mov PET.nii.gz --s subjID --targ 
$SUBJECTS_DIR/subjID/mri/orig.mga --regheader --o PET_T1.nii.gz

mni152reg --s subjID
then
mri_vol2vol --inv --targ PET_T1.nii.gz --mov 
$FSL_DIR/data/standard/MNI152_T1_2mm_brain.nii.gz --o PET_T1_2MNI153_2mm.nii.gz 
--interp nearest --reg $SUBJECTS_DIR/subjID/mri/transforms/reg.mni152.reg.dat

I still not happy with thresults. PET not perfectly moved to MNI.
please are the steps above correct? Can you kindly suggest any ideas to improve 
PET registration to MNI?

Thanks
John
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Reply via email to