External Email - Use Caution Hi Bruce,
Thanks for your comment! I used mri_annotation2label to existed lh.aparc.annot file in label folder and got the labels. but the labels' text file contain 0 in fifth column. I need to create atlas from my own data including surface parcellation. how can I do that? I found commands; mris_ca_train and mris_ca_label, how can I make the annotation files from my own data? BR, Atena On Wed, Mar 6, 2019 at 1:10 AM Bruce Fischl <fis...@nmr.mgh.harvard.edu> wrote: > Hi Atena > > yes, mri_annotation2label should work, although it really depends on what > you want to do next > > cheers > Bruce > On Wed, 6 Mar 2019, Atena Rezaei wrote: > > > > > External Email - Use Caution > > > > Hello, > > > > I am trying to extract the cortical parcellation(atlas) file from > freesurfer with all the labels. I found > > the lh.aparc.annot file in label folder. Should I use > mri_annotation2label to create labels? or how can I > > extract the whole file? > > Thanks for ur help! > > > > BR, > > Atena > > > > > >_______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
