Hi Mahsid

matlab is probably the easiest way, but without knowing what format you have them in it isn't easy for us to say. In matlab you can use write_annotation or write_ascii_curv or something to get it into a format we can handle

cheers
Bruce


cheers
Bruce
On Fri, 10 May 2019, mahshid fouladivand wrote:


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Hello Dear Freesurfer Experts,

I have a high resolution brain cortex parcellation that is not extracted from 
Freesurfer. Now I
want to display the nodes(each parcels) on the pial and inflated surfaces. Both 
pial and inflated
surfaces have been extracted from T1mprage image of the corresponding subject 
using recon-all.
Also, the parcels and the T1 image are in the same space. Now, I am wondering 
is it possible to map
these parcels on the Freesurfer pial/inflated surface?
By the way, How can I create an .annot file for my parcels?
If you could help me with this, I really appreciate your help.

Regards,
Mahshid

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