External Email - Use Caution Dear Freesurfer community,
I am trying to extract SUV values from sub-cortical segmentation or gtmseg I don t want to use any PVC. I used the following commands: gtmseg --s xyz then mri_coreg --s xyz --mov abetapet.nii.gz --reg abetapet.reg.lta following mri_vol2vol --mov abetapet.nii --reg abetapet.reg.lta --targ orig.mgz --o abetapet.sm00.nii.gz and mri_segstats --annot xyz lh gtmseg --i abetapet.sm00.nii.gz --sum xyz_abeta.stats resulting in this dimension mismatch error: input 256 256 256 seg 416 450 476 Is that the correct way for doing this analysis? any suggestions how to solve the mismatch error? Thanks, Boris
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