External Email - Use Caution Hello,
I am running tracula on some of my DTI data and have had no issues for most of my subjects. However, for one of them I get the following error after mri_segreg MRISread(/Volumes/DANIEL/freesurfer_pin/APOE.269/surf/lh.white): could not open file Loading mov Extracting frame 0 Projecting LH Surfs Loading lh.white surf No such file or directory It doesn't make sense that I am getting this error because when looking in that exact folder I see the following [255a-280:freesurfer_pin/APOE.269/surf] amos% ls lh.area lh.smoothwm.FI.crv rh.area rh.smoothwm.FI.crv lh.curv lh.smoothwm.H.crv rh.curv rh.smoothwm.H.crv lh.defect_borders lh.smoothwm.K.crv rh.defect_borders rh.smoothwm.K.crv lh.defect_chull lh.smoothwm.K1.crv rh.defect_chull rh.smoothwm.K1.crv lh.defect_labels lh.smoothwm.K2.crv rh.defect_labels rh.smoothwm.K2.crv lh.inflated lh.smoothwm.S.crv rh.inflated rh.smoothwm.S.crv lh.inflated.H lh.smoothwm.nofix rh.inflated.H rh.smoothwm.nofix lh.inflated.K lh.sphere rh.inflated.K rh.sphere lh.inflated.nofix lh.sphere.reg rh.inflated.nofix rh.sulc lh.orig lh.sulc rh.orig rh.white.H lh.orig.nofix lh.white.H rh.orig.nofix rh.white.K lh.qsphere.nofix lh.white.K rh.qsphere.nofix rh.white.preaparc lh.smoothwm lh.white.preaparc rh.smoothwm rh.white.preaparc.H lh.smoothwm.BE.crv lh.white.preaparc.H rh.smoothwm.BE.crv rh.white.preaparc.K lh.smoothwm.C.crv lh.white.preaparc.K rh.smoothwm.C.crv It looks like the file it can't open is there? I have attached the log file for recon-all and trac-all the subject in case it might help. Thank you, *Daniel Callow* *PhD Student, Neuroscience and Cognitive Science* Exercise for Brain Health Lab University of Maryland, College Park *ddcc2...@gmail.com <ddcc2...@gmail.com>* 443-254-6298
recon-all-status.log
Description: Binary data
trac-all.error
Description: Binary data
trac-all.log
Description: Binary data
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