Yes, that is correct. It is testing the null hypothesis A=B=C=D=E=F. That hypothesis will be rejected if A is different from B-F, which is what you are testing. The other contrasts are redundant (and would cause an error if you added them to the contrast matrix)z
On 10/16/19 12:03 PM, cody samth wrote: External Email - Use Caution Hi, I'm designing an analysis that will have 6 groups (two factors/three levels). I was wondering if I could get some input regarding my contrast for the group effect. Based on the group effect contrast under the FSGD examples for 3 groups I've written a five line contrast file that compares group 1 against the other 5 groups. 1-1 0 0 0 0 1 0 -1 0 0 0 1 0 0 -1 0 0 1 0 0 0 -1 0 1 0 0 0 0 -1 Which from my understanding should cover the rest of the contrasts such as 2v5 3v6 and etc. Is my understanding of this correct? _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu<mailto:Freesurfer@nmr.mgh.harvard.edu> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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