Hi Vinny

why do you need to brain structures from MNI space? Isn't the aseg sufficient? Or are there structures that are not in the aseg?

cheers
Bruce
On Sat, 19 Oct 2019, Vinny K wrote:


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Hi,
FreeSurfer does a great job in registering atlas structures to patients with
big ventricles.  I'd like to use the calculated FreeSurfer transforms in
bringing additional subcortical structures from MNI space (either MNI305 or
MNI2009b) into native T1 space.  Can you please advise on how to do this?

Thanks,

Vinny  

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