Can you get the coords by loading the segmentation in freeview and
clicking on what you want the corners to be?
On 5/11/2020 2:42 PM, Del Re, Elisabetta wrote:
The voxels are boxes
In coronal we have been using the uncus to divide in anterior vs
posterior.
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*From:* [email protected]
<[email protected]> on behalf of Douglas N. Greve
<[email protected]>
*Sent:* Monday, May 11, 2020 2:25 PM
*To:* [email protected] <[email protected]>
*Subject:* Re: [Freesurfer] Hippocampus {Disarmed}
And how do you want to define your voxel? As a bounding box around a
particular structure (or structures)? Which ones?
On 5/11/2020 2:12 PM, Del Re, Elisabetta wrote:
Hi Douglas,
basically yes.
Thank you so much,
Elisabetta
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*From:* [email protected]
<mailto:[email protected]>
<[email protected]>
<mailto:[email protected]> on behalf of Douglas
N. Greve <[email protected]> <mailto:[email protected]>
*Sent:* Monday, May 11, 2020 1:15 PM
*To:* [email protected]
<mailto:[email protected]>
<[email protected]> <mailto:[email protected]>
*Subject:* Re: [Freesurfer] Hippocampus {Disarmed}
I'm still not sure what you are asking for. Do you want coordinates
for your MRS voxels for each subject?
On 5/11/2020 12:53 PM, Del Re, Elisabetta wrote:
I'm trying to recreate the same freesurfer subdivision during MRS
acquisition of 2 voxels for anterior and posterior hippocampus. I am
trying to find a way to be consistent and recreate the two big
freesurfer anterior/posterior voxels. I am looking for suggestions
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*From:* [email protected]
<mailto:[email protected]>
<[email protected]>
<mailto:[email protected]> on behalf of
Iglesias Gonzalez, Juan E. <[email protected]>
<mailto:[email protected]>
*Sent:* Monday, May 11, 2020 12:18 PM
*To:* Freesurfer support list <[email protected]>
<mailto:[email protected]>
*Subject:* Re: [Freesurfer] Hippocampus
Dera Elisabetta,
Can you please give us some more detail on what you mean by “I am
trying to translate the same subdivision to MRI acquisition for
spectroscopy purposes.”?
Cheers,
/E
Juan Eugenio Iglesias
Senior research fellow
CMIC (UCL), MGH (HMS) and CSAIL (MIT)
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*Date: *Monday, May 11, 2020 at 09:42
*To: *"[email protected]"
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*Subject: *[Freesurfer] Hippocampus
Dear Freesurfer team,
I have analyzed the anterior/posterior hippocampus successfully
utilizing FS6.0.
I am trying to translate the same subdivision to MRI acquisition for
spectroscopy purposes.
Do you have suggestions?
Thank you very much,
regards,
Elisabetta
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