External Email - Use Caution
In freesurfer version 5.3.0, I can successfully run:
recon-all -autorecon-all -mprage -s $subj -qcache -localGI
recon-all -s $subj -qcache -measure pial_lgi
However, the same commands with 7.1.0 give an error after this last of a number
of generated statements and no surf/*pial_lgi output:
mris_preproc --s 147608 --hemi lh --meas pial_lgi --target fsaverage --out
lh.pial_lgi.fsaverage.mgh
nsubjects = 1
ERROR: cannot find subjects/147608/surf/lh.pial_lgi
Is a new command needed for version 7.1.0?
Thanks,
Kathy Pearson
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