Dear FreeSurfer experts!
We are running FsFast pipeline to analysis our language task for epilepsy
patients.
Usually we are using FreeSurfer 5.3. We want to use a newer version, so I
decided to jump right to 7.1 (dev)
When trying to run
preproc-sess -surface {trg_subject} lhrh -s {subject} -fwhm {fwhm} -fsd {fsd}
-mni305 -per-run -stc siemens
I got the following error:
mri_info --nslices --o
/autofs/space/megraid_clinical/MEG-MRI/seder/freesurfer/nmr01415/sycabs/005/tmp.110620/nslices.dat
/autofs/space/megraid_clinical/MEG-MRI/seder/freesurfer/nmr01415/sycabs/005/fmcpr.nii.gz
nslices = 44
slicedelay --nslices 44 --siemens --o
/autofs/space/megraid_clinical/MEG-MRI/seder/freesurfer/nmr01415/sycabs/005/tmp.110620/sdf.txt
--ngroups 1
File "/usr/local/freesurfer/dev/bin/slicedelay", line 9
print "USAGE: slicedelay --help";
^
SyntaxError: Missing parentheses in call to 'print'
When I reran the same pipeline with FreeSurfer 5.3, it seems to work.
Is it a bug in 7.1? Or should we change something in the call?
Thanks,
Noam
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