External Email - Use Caution Hi, Freesurfer expert
I tried Hippocampal subfield segmentation with an additional T2 scan by using FS7.1.0 Here is the log error massage Attempted to access cropping(1); index out of bounds because numel(cropping)=0. Error in applyCropping (line 7) Error in segmentSubjectT1T2_autoEstimateAlveusML (line 950) MATLAB:badsubscript @#@FSTIME 2021:03:01:20:38:39 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 18 e 243.67 S 3.47 U 220.01 P 91% M 1248336 F 144 R 909119 W 0 c 49601 w 14948 I 320352 O 429920 L 30.66 34.91 35.10 @#@FSLOADPOST 2021:03:01:20:42:43 run_segmentSubjectT1T2_autoEstimateAlveusML.sh N 18 47.20 43.27 38.55 Linux gra813 3.10.0-1127.8.2.el7.x86_64 #1 SMP Tue May 12 16:57:42 UTC 2020 x86_64 GNU/Linux T2 hippocampal subfields exited with ERRORS at Mon Mar 1 20:42:43 EST 2021 For more details, see the log file /home/weishao//BAY11958/scripts/hippocampal-subfields-T2.T2.log Could you tell me how to fix this? Thanks. Best, Wei
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