Dear Freesurfer team,I am currently preparing my first fMRI study and used OptSeq2 for creating the trial sequence. Since I am not experienced with the study design in MRI (I mainly conducted EEG studies so far), I would like to have your professional opinion on my design choices and use of your program.
The parameters of my study are the following:I will conduct a multiband fMRI study with an event-related design that will have a TR of 0.5s. I will present 10 different types of trials that will have a length of 2.5s each, but that will be shown with different amounts of repetitions across the experiment. Within the 2.5s trial time, I included a fixed time period of 1.3s to respond.
As indicated in your recommendations, I added time to the overall presentation time for the "NULL events" that corresponds to the time needed for one of my trial types (as if I would have another trial type). You can find the output of OptSeq attached.
My questions are the following:1) Did I use the program correctly by having a fixed response time window within the trial duration estimation?
2) Is the use of the NULL events (as can be seen in the attached file) correct and sufficient to introduce varying amounts of time between the individual trials such that the hemodynamic response can be captured appropriately?
3) In the summary of the OptSeq results, I found an efficiency value of 0.009 and a VRFAvg of 6.24. I saw in your recommendations that the VRFAvg should be 20-40. Is the result of my calcuation too bad to have an efficient recording that allows analyzing the data in an event-related manner?
4) In the actual experiment I will present the attached sequence twice. I have now the options to either present two different sequences (e.g. the two most efficient sequences produced by OptSeq) or to repeat the most efficient sequence twice. Do you have a recommendation? And further, might using the same sequence across participants result in a general ordering effect that might bias my results?
I am very much looking forward to your response and already thank you for your advice and help!
Kind regards, Ellen Joos -- Dr. rer. nat. Ellen JOOS INSERM U1114 Hôpital Civil / Clinique psychiatrique 1 place de l'hôpital 67085 STRASBOURG Tel: +33.3.88.11.61.31
optseq_MRI_CondSL.ods
Description: application/vnd.oasis.opendocument.spreadsheet
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