External Email - Use Caution Thanks a lot Bruce,
Have a nice day, Aldo From: freesurfer-boun...@nmr.mgh.harvard.edu <freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Fischl, Bruce Sent: Monday, May 24, 2021 10:17 AM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] How to extract the GM and WM Hi Aldo Usually we just run recon-all with -all instead of the individual -autorecon options. This will give you pretty much everything, including GM and WM Cheers Bruce From: freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu> <freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> On Behalf Of Camargo, Aldo Sent: Sunday, May 23, 2021 11:25 PM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>> Subject: [Freesurfer] How to extract the GM and WM External Email - Use Caution External Email - Use Caution Hi Freesurfer experts: I want to extract the White Matter and the Gray Matter from a T1 image. I have extracted the brain by using the command: recon-all with the option -autorecon1 Thanks a lot and have a nic day, Aldo
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