In FreeView, go to "View/Edit". From the resulting interface, you can turn on and off any parcellations you want.
On 7/5/2021 1:04 PM, Ellen Ji wrote: > External Email - Use Caution > > Dear experts, > > I have a basic visualization question. > I would like to create a surface brain figure with specific cortical > parcels colored. Similar to > https://secure-web.cisco.com/1DryTPj2WrD-LULa8TF6HVh2xwKTLAaWDFvIpAUrs4z6O2VOFttAjezDQX2aR4Z5m6bFRIWk8l6q3Kc0B4K1EjsGa3Ps7AUkb5SPODPx-r-FwnmCtHYHHKbdbpiaWUNhY_vlBvQaG-4Cl9kGxomgOLjtwUjpfxAwjLULtd8raS9pKKnnCsUkx0wW3RSuyX62NEemue5GJ8QZ5J46l4PfzCFjifys8EQeNVKxstOck3xiE-BXhju-kVWs7GQxLXjjk6zMrtaHPswi0sl3CPcqM2A/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FFsTutorial%2FOutputData_freeview%3Faction%3DAttachFile%26do%3Dget%26target%3Dgood_output_aparc_crop.png > but not with ALL parcels in the atlas selected. > > I know that I can go into a subject folder and load this freeview -f > surf/lh.pial:annot=aparc.annot in order to see the entire Desikan > Killiany atlas. However, I would like to select 4-5 rois. > > What's the best way to do this? It won't be related to any results and > doesn't need to be from a particular subject's brain (can also be > fsaverage). It's purely to highlight some cortical parcels for > visualisation purposes. > > Thanks, > Ellen > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at http://www.massgeneralbrigham.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
