Look in /media/sf_T1/recon/demo3/surf
Does lh.white.preaparc.H exist?
If so, does lh.white.H exist?
If not, what happens when you run
ln -s lh.white.preaparc.H lh.white.H
in that folder?
On 8/5/2021 1:41 AM, guang wrote:
External Email - Use Caution
Hello FreeSurfer Developers,
I'm attempting to preprocess my nii.gz files with FreeSurfer, But some
errors occurred when I recon-all the data. I've attached the batch
script and recon-all.log in case it's of any use.
1) FreeSurfer version:
freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
2) Platform: CentOS release 6.10 (Final)
3) uname -a: Linux bogon 2.6.32-754.2.1.el6.x86_64 #1 SMP Fri Jul 13
12:50:12 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
4) recon-all.log: see attached
5) batch .sh file:see attached
Thank you for any reply.
zhaoguang
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