External Email - Use Caution Hi, Dear Freesurfer experts
I'm have met a recon-all errors with data collected recently like this ADNI_002_S_6652_MR_Accelerated_Sagittal_MPRAGE__br_raw_20190122095958285_147_S786989_I1118713.dcm The attachments are the recon-all script and the output log. Can you help me with this? Thanks Best, Wei
recon-all.log
Description: Binary data
module load nixpkgs/16.09 module load freesurfer/7.1.0 source $EBROOTFREESURFER/FreeSurferEnv.sh export SUBJECTS_DIR=/home/weishao/scratch/ADNI-MCI/subjects recon-all -all -i /home/weishao/scratch/ADNI-MCI/ADNI/032_S_6652/Accelerated_Sagittal_MPRAGE/2019-06-07_09_08_48.0/I1174541/ADNI_032_S_6652_MR_Accelerated_Sagittal_MPRAGE__br_raw_20190610135118632_19_S831455_I1174541.dcm \ -s S6652 -openmp 32 echo "job is done"
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