External Email - Use Caution Responding re: Douglas Greve
How exactly did you create the LUT? Eg, in windows using notepad? I'm thinking that there might be some hidden characters in there as the color is wrong. I did notice that your first entry had a value of 5 in the last column; usually this is 0 (not sure what it is for). What happens if you switch the LUT to the default? Do you get reasonable colors (even if the names are wrong)? Reply: I used a custom python script that creates a LUT for each subject. Then I ran dos2unix to ensure the line endings were appropriate. If I load the default FS LUT only 2 ROIs are being labeled. Does this mean that I have an issue with my mri_concat call? Which is: mri_concat --sum --f vols.txt --o sub_vols.mgz Thanks, Ben -- *Benjamin L. Deck* *Doctoral Student* *Applied Cognitive and Brain Sciences* *Department of Psychological and Brain Sciences* *Drexel University* <https://secure-web.cisco.com/1orR-DWFSm7AzAYYcqvCSHmblQoGORO7YzkKJqo0iTu7-ysKMneqiJIB914MLo59YkJqozzyS-ZYvEmsjfYZ-WRPwN9DkX_AezdGhpvKU2LHZseaLjN_pqFfvqE9K_9Eb8jcrG_fy3Sqx_E1WWkgfvqxBpxdULKUdqoHpZSRz2HIjOFSI3kVrQ3I8AjZ2vJydm-kwNnameEcwcBoNrCTynvHwljQJ0JIK4xh1JYMxYqZ6SsJ21pyNj05itbv664ZDeltcN1_uI5hJ3ZiOWZkjRl--hlt4ymwEHoSXW4BnnavPb4pK9ZO-H1l6GKUnTNsDVGpDPvfgbErAM7j-puzDRQ/https%3A%2F%2Fwww.avast.com%2Fsig-email%3Futm_medium%3Demail%26utm_source%3Dlink%26utm_campaign%3Dsig-email%26utm_content%3Dwebmail%26utm_term%3Dicon> Virus-free. http://secure-web.cisco.com/1y12Z5EuR0Thcv3zHQ2WDObPbPtIi3GheXNDJxePf3SumjpabRgcr4mSAE7CpZyN_1akPJMGsIZn4crPcnVgaqe8WHMq9snCJON-7n-nDjSVQ8uSbTMxPMPKd3Xvt06gjOMubNHaigMGo4gd_Zq6CjjdfSHWmxajaR5i0_fhCMVqlnZ0SgIDdBuWsSNEYR8358zOpo0fXQR9SNUd33U7jc8tnnk2B3nL1TQVVhx1kE5CS8rqJI46X1rVDVRTwsoLR9boFgj8b4hsteK5X7lnPx_ofZh4QWYfSpqvQA6y6nwQBMrDtKpkL_CNWkXr_yS-zA_iKUsrjF0sJzallJbX9NQ/http%3A%2F%2Fwww.avast.com <https://secure-web.cisco.com/1Q_PewrE8ioL4nGaDXS3HygbqgAIyt7ilGvMJtVbT_Yof-G81xhAIQ5t31xNREI6mrNHRJCGChvOl_UNEEkz3Mn8y2jlcNAW3b_5DTtubD6H8MJrvMDQR0Rt0Qub68uwKV6Tzf1qZ3jQ0dSlRAoI6RezN59eD__Xhlk30lC-rrHfjqNjH4T66U3h8S-Jb4wjx_HjNFN9b2fFOuYGMQB6CabooHcjX5tNh_Gigk_s0bD3zgpeZ-PA2vU0EempK4Fc9Smb_WMFPL_KEKM-rdXOxA6cTVPTZhNXGWoaBS0e5MH8vfJonY5jWTDzOry2YBYKCWjty0zlrxDbSRT29vo5YEA/https%3A%2F%2Fwww.avast.com%2Fsig-email%3Futm_medium%3Demail%26utm_source%3Dlink%26utm_campaign%3Dsig-email%26utm_content%3Dwebmail%26utm_term%3Dlink> <#DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2>
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