External Email - Use Caution
Dear Yujing:
I wasn’t aware that there was an answer to my email that’s the reason it took
me a while to write back. But I answer here.
Yes I mean lh.pial.T1. I don’t have any other lh.pial. The recon-all command is
properly correct like recon-all -all -i -s -openmp 8. Yes the freesurfer
version is 7.1.1.
Best,
Rene Andrade.
Hi Rene,
Do you mean lh.pial.T1? Do you have any other lh.pial* files in the directory?
What is your recon-all command line? And can you also provide the Freesurfer
version you are running?
Best,
Yujing
-----Original Message-----
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Renew Andrade
Sent: Tuesday, December 13, 2022 7:24 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] lh.pial lh.pialT1n same file?
External Email - Use Caution
Dear experts:
I am wondering if lh.pial and lh.pialT1 are the same files. I don’t have
lh.pial is that an error from recon-all? Should I rerun recon-all. Or just
autorecon-pial? Would that change anything?
Best,
Rene Andrade.
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://secure-web.cisco.com/1LCc5ul3ZUaRdFDtH5um-8jSLqyO6Y34dKd_-lEHcjceUhikqvOaXZk8PcHuuvG75vi93ygVmLAcCIVKDj3QWtyCBzjaqs23YD4RiZOIukj54Nrt1SduE2_ClzT2k8GIsk8QcwJ5fvGd34CMTT-DmgnUqlLv2i1xg35-TtIjEY5K50GfhrOhbsFaiAR24hm0TLfkOAs7mFstc2cLGJ1NkR7MDsrxE2tnkVoPEBKQgieVLbbDe5jT3o1g0OkFSG-SYas0z2x5R3QWl9p5UDpxeQ6J1Pv39YhQd7MFUrC-fbaNPeRaRctKr2g6RqNE5oX-1F_Pp7fKU4mf5B_G0QkKWEQ/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://secure-web.cisco.com/1LCc5ul3ZUaRdFDtH5um-8jSLqyO6Y34dKd_-lEHcjceUhikqvOaXZk8PcHuuvG75vi93ygVmLAcCIVKDj3QWtyCBzjaqs23YD4RiZOIukj54Nrt1SduE2_ClzT2k8GIsk8QcwJ5fvGd34CMTT-DmgnUqlLv2i1xg35-TtIjEY5K50GfhrOhbsFaiAR24hm0TLfkOAs7mFstc2cLGJ1NkR7MDsrxE2tnkVoPEBKQgieVLbbDe5jT3o1g0OkFSG-SYas0z2x5R3QWl9p5UDpxeQ6J1Pv39YhQd7MFUrC-fbaNPeRaRctKr2g6RqNE5oX-1F_Pp7fKU4mf5B_G0QkKWEQ/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Mass General Brigham
Compliance HelpLine at
https://secure-web.cisco.com/1p9vuo0RkhGo0Iv6s95QbouvIcUud21_PCVthVxZ9GM4V615SvqLcuvZ5rr5zC-dpkySW8R1onZxsRbzqwYXd60AAdw3tiROcdYo6WszkyBzADIzmsnajnZdyl_IqfJTZ-dCRoXWPX7cUvxosrrgMIFvPg3keCQfC1AGulOtN9Ppt_k0XWxWipVR-JxC5PqTmO0bPjV-TlNi1dutyv8TSyW6mnwCV8cK2w7tU0I7Q6iLOeNPBU4rGgpfu6Q5YAc6YcOTtaz-APvLQcUq56DLe-TYpqrsLN4RkFKhXL_IMOFTP7Lp7Pwq3ELUpA505Ps94a-Y22Nv2qTxe3P9gvaj4Pg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline
<https://secure-web.cisco.com/1p9vuo0RkhGo0Iv6s95QbouvIcUud21_PCVthVxZ9GM4V615SvqLcuvZ5rr5zC-dpkySW8R1onZxsRbzqwYXd60AAdw3tiROcdYo6WszkyBzADIzmsnajnZdyl_IqfJTZ-dCRoXWPX7cUvxosrrgMIFvPg3keCQfC1AGulOtN9Ppt_k0XWxWipVR-JxC5PqTmO0bPjV-TlNi1dutyv8TSyW6mnwCV8cK2w7tU0I7Q6iLOeNPBU4rGgpfu6Q5YAc6YcOTtaz-APvLQcUq56DLe-TYpqrsLN4RkFKhXL_IMOFTP7Lp7Pwq3ELUpA505Ps94a-Y22Nv2qTxe3P9gvaj4Pg/https%3A%2F%2Fwww.massgeneralbrigham.org%2Fcomplianceline>
.
Please note that this e-mail is not secure (encrypted). If you do not wish to
continue communication over unencrypted e-mail, please notify the sender of
this message immediately. Continuing to send or respond to e-mail after
receiving this message means you understand and accept this risk and wish to
continue to communicate over unencrypted e-mail. _______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is
addressed. If you believe this e-mail was sent to you in error and the e-mail
contains patient information, please contact the Mass General Brigham
Compliance HelpLine at https://www.massgeneralbrigham.org/complianceline
<https://www.massgeneralbrigham.org/complianceline> .
Please note that this e-mail is not secure (encrypted). If you do not wish to
continue communication over unencrypted e-mail, please notify the sender of
this message immediately. Continuing to send or respond to e-mail after
receiving this message means you understand and accept this risk and wish to
continue to communicate over unencrypted e-mail.
