Dr. Rakshathi,
To help us to get a better picture, can you send the full recon-all.log?
Best,
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> On Behalf Of Rakshathi Basavaraju
Sent: Friday, January 27, 2023 5:41 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] What if FS fails
External Email - Use Caution
What is to be done if we get such an error message for recon-all: (copied from
recon-allstatus log)
status file for recon-all
Tue Jan 3 22:43:36 IST 2023
#@# MotionCor Tue Jan 3 22:43:41 IST 2023
#@# Talairach Tue Jan 3 22:43:53 IST 2023
#@# Talairach Failure Detection Tue Jan 3 22:47:14 IST 2023
#@# Talairach Tue Jan 3 22:47:15 IST 2023
#@# Talairach Failure Detection Tue Jan 3 22:50:31 IST 2023
#@# Talairach Tue Jan 3 22:50:32 IST 2023
#@# Talairach Failure Detection Tue Jan 3 22:53:29 IST 2023
Darwin JAGADISHAs-Mac-mini.local 21.2.0 Darwin Kernel Version 21.2.0: Sun Nov
28 20:29:10 PST 2021; root:xnu-8019.61.5~1/RELEASE_ARM64_T8101 x86_64
recon-all -s subj39_anat exited with ERRORS at Tue Jan 3 22:53:30 IST 2023
Dr. Rakshathi Basavaraju (M.D. Psychiatry)
Assistant Professor (Department of Health Research-sponsored return-home
research fellowship)
Principal Investigator - OPCINSS
Department of Psychiatry
National Institute of Mental Health and Neurosciences (NIMHANS)
Bengaluru, Karnataka, India-560029
Phone: +91-9480829898/+91-80-26972156/+91-80-26995320
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