Hi Mark, Sorry for the late reply.
The population template was built using the FA images only, so there is no corresponding T1 template image. You can use the transforms stored in dmri/xfms in your TRACULA directory to map the subject’s anatomical images to this template space, or you can set the interreg variable in your dmrirc configuration file to 1 or 2 to have your TRACULA common space be the MNI152 T1 1mm space instead. I hope this helps, Chiara Dear Freesurfer developers, Hi, this message may have slipped through the cracks, hope someone can help us out on this. We're looking for the T1 image that goes along with (i.e. in same space, or at least in same participants) as the MGH35_HCP_FA_template image which is used in TRACULA? Does such a template exist, and if so, would it be possible to share? Thanks so much! Mark ____________________ Mark Wagshul, PhD Associate Professor Gruss Magnetic Resonance Research Center Albert Einstein College of Medicine Bronx, NY 10461 Ph: 718-430-4011 FAX: 718-430-3399 Email: mark.wags...@einsteinmed.ed<mailto:mark.wags...@einsteinmed.edu>
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