I'm not sure I know what you mean. Why do you want to map them to
fsaverage?
I'm cc'ing Lilla about the age question
On 4/14/2025 11:36 AM, Stefanie Bradley wrote:
External Email - Use Caution
Thank you!
To resample a subject's surfaces to a common space (fsaverage), is the
best way to use mri_surf2surf? E.g., for ?h.inflate, ?h.pial, etc.
And is using fsaverage appropriate to use for pediatric brains (aged
4-6 years old)?
Thanks,
Stefanie
------------------------------------------------------------------------
*From:* freesurfer-boun...@nmr.mgh.harvard.edu
<freesurfer-boun...@nmr.mgh.harvard.edu> on behalf of Douglas N. Greve
<dgr...@mgh.harvard.edu>
*Sent:* Monday, April 14, 2025 10:12 AM
*To:* freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu>
*Subject:* Re: [Freesurfer] clarification - recon-all output data
All outputs from recon-all are in native space
On 4/12/2025 5:57 PM, Stefanie Bradley wrote:
External Email - Use Caution
Hi there,
I wanted to clarify about the recon-all output: is it in the
subject's native space or is everything already mapped to fsaverage
space?
For example, is aparc.stats based on the brain in the subject's
native space or has the cortical surface already been transformed to
fsaverage space, and then stats (ex., cortical thickness) derived
after that?
Thanks,
Stefanie
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