Owen asks:
 
> Do we have a good foundational approach to analog computing?  For  
> example, analog automata, computational theory on decidability for  
> analog computers, a notion of analog computational complexity?

I don't know what values to assign to "we" and "good" to
make the answer "yes"; but there is, for instance, a
somewhat lively continuing effort by Smale, Shub, and Blum
(in various combinations and with other collaborators)
on foundational (and implementation) issues related to 
computation with real numbers (that's *real* real numbers,
not floating point or the like), and there's also been
an effort (which I think is now less lively, but I may
just be out of touch) somehow mixing differential equations
with (non-)recursive function theory...if I can track down
anything more about the latter, before someone else does,
I'll update all y'all.  (Meanwhile  you can look up
"Blum-Shub-Smale machines" and see if they are relevant
to your intentions.)

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