No it won't affect it...cold fusion files looks for the "closest"
application file up their directory tree. So if a .cfm is executed in a
directory where an application.cfm is present, then it uses that one and
only that one. If it doesn't find one, it keeps going up a directory level
until it finds one or the top-level or root directory has been reached. So
keep in mind if your root has an application.cfm, and you don't specify one,
your cfm files will include that root application.cfm which you might not
have control over. So best to use one in this instance. The search
algorithms only go up a directory and won't go down into other directories.
So your application.cfm will not interfere with one at the same directory
level.
If you are using FUSEBOX, using application.cfm is not recommended because
application.cfm is not invoked when a file is called as a custom tag (such
as CF_SCRIPTNAMEHERE or <CFMODULE template="SCRIPTNAME">).
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