On Nov 14, 2011, at 3:54 AM, remy d1 wrote:

> Hello,
> 
> In my configuration, I submit job through SGE. I have a cluster in the 
> backend. If nodes are shutdown job is in state "queue wait" and I noticed 
> that it disappear sometime. Is there a timeout somewhere in galaxy which is 
> monitoring jobs ? In fact, I whish to use a script in SGE which is halting or 
> booting nodes according to the SGE queue.

Hi Rem,

Galaxy interfaces with the queue much like qstat does.  There should be no 
timeout, it will simply continue to poll for the state of jobs until they are 
in a terminal state (or are no longer listed in the list of jobs currently 
known by SGE).

--nate

> 
> 
> -Regards
> Rem.
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